Occurrence record: 102.100.100/13467:0d47a57f64db8a62350a98c1f5f63af3

Material Sample of Clostridium 1880 Prazmowski recorded on 2006-03-08

API

Dataset

Data resource	Australian Microbiome 16S (Bacteria) Dataset of Terrestrial Samples from Australian Territories
Occurrence ID	102.100.100/13467:0d47a57f64db8a62350a98c1f5f63af3
Record type	Material Sample
License	CC-BY 4.0 (Int)
Presence/Absence	PRESENT
Organism quantity	12
Material sample ID	102.100.100/13467
Organism quantity type	DNA sequence reads

Event

Event ID	102.100.100/13467
Occurrence date	2006-03-08
End day of year	67
Date precision	DAY
Start day of year	67

Taxonomy

Scientific name	Clostridium 1880 Supplied scientific name "Clostridium estertheticum"
Identified to rank	genus
Kingdom	Bacteria
Phylum	Firmicutes Supplied as "Firmicutes_A"
Class	Clostridia
Order	Clostridiales
Family	Clostridiaceae
Genus	Clostridium
Name match metric	higherMatch
Scientific name authorship	Prazmowski
Name parse type	SCIENTIFIC

Geospatial

Country	Antarctica
Latitude	-66.282041 Supplied as: "-66.282041"
Longitude	110.525541 Supplied as: "110.525541"
Datum	EPSG:4326
Minimum depth in metres	0.1
Maximum depth in metres	0
Coordinate precision	Unknown
Terrestrial	true
Elevation	33.3
Biome	TERRESTRIAL
Marine	false
Country Code	AQ
Depth	0

Additional properties

0000012	1 Conservation and Natural Environments
0000013	1.1.2 Wilderness area
0000091	https://data.bioplatforms.com//organization/australian-microbiome?q=sample_id:102.100.100/13467
conductivity in decisiemens per meter	0.0316
gravel in percent	18.2
organic carbon in percent	0.27
phosphorus colwell in milligram per kilogram	582.4
sand in percent	66.1
silt in percent	15.8
slope aspect in direction or degrees	340.949493
slope gradient in percent	8.213741
water content in percent	7.681736706
dna sequence	GACGAACGCTGGCGGCGTGCCTAACACATGCAAGTCGAGCGATGAAACCCTTCGGGGTGGATTAGCGGCGGACGGGTGAGTAACACGTGGGTAACCTGCCTCAAAGAGGGGAATAGCCTCCCGAAAGGGAGATTAATACCGCATAATATGTTTTGATCGCATGATTGAGACATCAAAGGATGTTCTTCGGAACTTCCACTTTGAGATGGACCCGCGGCGCATTAGCTAGTTGGTGAGGTAACGGCCCACCAAGGCAACGATGCGTAGCCGACCTGAGAGGGTGATCGGCCACATTGGAACTGAGACACGGTCCAGACTCCTACGGGAGGCAGCAGTGGGGAATATTGCGCAATGGGGGAAACCCTGACGCAGCAACGCCGCGTGAATGATGAAGGCCTTCGGGTTGTAAAGTTCTGTCTTCTGGGACGATAATGACGGTACCAGAGGAGGAAGCCACGGCTAACTACGTGC
local class	LatLon out of range
local class meth	meth_2.27 (https://research.csiro.au/ambsm/)
ph solid h2o	6.36

User flagged issues

Data quality tests

Test name	Result
Coordinate uncertainty meters invalid	Warning
Country inferred from coordinates	Warning
Min and max depth reversed	Warning
Geodetic datum assumed WGS84	Warning
Taxon match higher rank	Warning
Show/Hide 82 passed properties
Basis of record badly formed	Passed
CONTINENT_COORDINATE_MISMATCH	Passed
Continent country mismatch	Passed
Continent derived from coordinates	Passed
CONTINENT_DERIVED_FROM_COUNTRY	Passed
Continent invalid	Passed
Coordinates centre of country	Passed
Supplied coordinates centre of state	Passed
Coordinate invalid	Passed
Coordinates are out of range for species	Passed
Coordinates converted to WGS84	Passed
Decimal latitude/longitude conversion failed	Passed
Coordinate reprojection suspicious	Passed
Coordinate rounded	Passed
Coordinates dont match supplied country	Passed
Country invalid	Passed
Country mismatch	Passed
Depth value non-numeric	Passed
Depth value supplied in feet	Passed
Depth unlikely	Passed
First of the century	Passed
First of the month	Passed
First of the year	Passed
Unrecognized geodetic datum	Passed
Georeferenced after occurrence date	Passed
Identification date before occurrence date	Passed
Interpretation error	Passed
Invalid scientific name	Passed
Location not supplied	Passed
Missing collection date	Passed
Multimedia date invalid	Passed
Multimedia uri invalid	Passed
Name not supplied	Passed
Occurrence status inferred from basis of record	Passed
Occurrence status inferred from individual count	Passed
Occurrence status unparsable	Passed
Latitude is negated	Passed
Longitude is negated	Passed
Presumed swapped coordinate	Passed
Recorded date invalid	Passed
Recorded date mismatch	Passed
Recorded date unlikely	Passed
SCIENTIFIC_NAME_AND_ID_INCONSISTENT	Passed
Sensitivity report invalid	Passed
Sensitivity report not loadable	Passed
Coordinates dont match supplied state	Passed
Taxon affinity species	Passed
TAXON_CONCEPT_ID_NOT_FOUND	Passed
Taxon confer species	Passed
Taxon default match	Passed
Taxon error	Passed
Taxon excluded	Passed
Taxon excluded associated	Passed
Taxon homonym	Passed
TAXON_ID_NOT_FOUND	Passed
Taxon indeterminate species	Passed
Taxon match aggregate	Passed
Taxon match fuzzy	Passed
TAXON_MATCH_NAME_AND_ID_AMBIGUOUS	Passed
Taxon match none	Passed
TAXON_MATCH_TAXON_CONCEPT_ID_IGNORED	Passed
TAXON_MATCH_TAXON_ID_IGNORED	Passed
Taxon misapplied	Passed
Taxon misapplied matched	Passed
Taxon parent child synonym	Passed
Taxon question species	Passed
Resource taxonomic scope mismatch	Passed
Taxon species plural	Passed
Coordinate precision and uncertainty transposed	Passed
Uncertainty not specified	Passed
Supplied country not recognised	Passed
Kingdom not recognised	Passed
Supplied coordinates are zero	Passed
Biosecurity issue	Passed
Suspected outlier	Passed
Geospatial issue	Passed
Habitat incorrect for species	Passed
Taxon misidentified	Passed
Taxonomic issue	Passed
Temporal issue	Passed
Other issue	Passed
Duplicate record	Passed
Show/Hide 7 missing properties
Missing geodetic datum	Missing
Missing georeferenced by	Missing
Missing georeference protocol	Missing
Missing georeference sources	Missing
Missing georeference verification status	Missing
Missing georeference date	Missing
Missing taxon rank	Missing
Show/Hide 30 tests that have not been run
Unrecognized collection code	Unchecked (lack of data)
Unrecognized institution code	Unchecked (lack of data)
Coordinate precision invalid	Unchecked (lack of data)
Footprint SRS invalid	Unchecked (lack of data)
Footprint WKT mismatch	Unchecked (lack of data)
Footprint WKT invalid	Unchecked (lack of data)
TAXON_MATCH_SCIENTIFIC_NAME_ID_IGNORED	Unchecked (lack of data)
SCIENTIFIC_NAME_ID_NOT_FOUND	Unchecked (lack of data)
Elevation unlikely	Unchecked (lack of data)
Min and max altitude reversed	Unchecked (lack of data)
Altitude value supplied in feet	Unchecked (lack of data)
Altitude value non-numeric	Unchecked (lack of data)
Modified date invalid	Unchecked (lack of data)
Modified date unlikely	Unchecked (lack of data)
Identified date unlikely	Unchecked (lack of data)
Identified date invalid	Unchecked (lack of data)
Type status invalid	Unchecked (lack of data)
References uri invalid	Unchecked (lack of data)
Individual count invalid	Unchecked (lack of data)
Individual count conflicts with occurrence status	Unchecked (lack of data)
Georeferenced date unlikely	Unchecked (lack of data)
Georeferenced date invalid	Unchecked (lack of data)
Ambiguous institution	Unchecked (lack of data)
Ambiguous collection	Unchecked (lack of data)
Institution not matched	Unchecked (lack of data)
Collection not matched	Unchecked (lack of data)
Institution match fuzzy	Unchecked (lack of data)
Collection match fuzzy	Unchecked (lack of data)
Institution and Collection mismatch	Unchecked (lack of data)
Different owner institution	Unchecked (lack of data)

Group	Field Name	Original Value	Processed Value


Classification	Scientific name	Clostridium estertheticum	Clostridium 1880
	Match type		higherMatch
	Phylum id		NZOR-6-60155
	Family id		NZOR-6-129319
	Taxon concept ID		NZOR-6-70079
	Order	Clostridiales	Clostridiales
	Taxon rank id		6000
	Genus	Clostridium	Clostridium
	Left		732097
	Scientific name authorship		Prazmowski
	Taxon rank		genus
	Genus id		NZOR-6-70079
	Taxon ID	ASV:0d47a57f64db8a62350a98c1f5f63af3
	Name type		SCIENTIFIC
	Order id		NZOR-6-106476
	Right		732135
	Kingdom	Bacteria	Bacteria
	Class id		NZOR-6-17000
	Phylum	Firmicutes_A	Firmicutes
	Class	Clostridia	Clostridia
	Family	Clostridiaceae	Clostridiaceae
	Kingdom id		https://www.catalogueoflife.org/data/taxon/B
Event	Event ID	102.100.100/13467
	Year		2006
	End day of year		67
	Month		3
	Date precision		DAY
	Start day of year		67
	Day		8
	Event date	2006-03-08	2006-03-08
Occurrence	Occurrence status		PRESENT
	Basis of record	MATERIAL_SAMPLE	MATERIAL_SAMPLE
	Organism quantity	12
	Material sample ID	102.100.100/13467
	Occurrence ID	102.100.100/13467:0d47a57f64db8a62350a98c1f5f63af3
	Organism quantity type	DNA sequence reads	DNA sequence reads
Attribution	Data resource		Australian Microbiome 16S (Bacteria) Dataset of Terrestrial Samples from Australian Territories
	License		CC-BY 4.0 (Int)
	Data Resource ID	dr23127	dr23127
Location	Country		Antarctica
	Decimal latitude	-66.282041	-66.282041
	Terrestrial	true	true
	Maximum depth in meters	0	0.0
	Verbatim elevation	33.3
	Decimal longitude	110.525541	110.525541
	Biome		TERRESTRIAL
	Marine	false	false
	Minimum depth in meters	0.1	0.1
	Country code		AQ
	Geodetic datum		EPSG:4326
	Verbatim depth	0