Occurrence record: 102.100.100/138337:025b41c7a336b24c1f0c5ec1aa827fd4

Material Sample of Rhodotorula F.C.Harrison recorded on 2019-11-09

API

Dataset

Data resource	Australian Microbiome ITS2 (Fungi)
Occurrence ID	102.100.100/138337:025b41c7a336b24c1f0c5ec1aa827fd4
Record type	Material Sample
Collector	Penelope Jones/Emily Flies
License	other
Presence/Absence	PRESENT
Organism quantity	1
Material sample ID	102.100.100/138337
Organism quantity type	DNA sequence reads

Event

Event ID	102.100.100/138337
Occurrence date	2019-11-09 Supplied date "2019-11-09T03:15:00Z"
End day of year	313
Date precision	DAY
Start day of year	313

Taxonomy

Scientific name	Rhodotorula Supplied scientific name "SH1008722.09FU"
Identified to rank	genus
Kingdom	Fungi
Phylum	Basidiomycota
Class	Microbotryomycetes
Order	Sporidiobolales
Family	Sporidiobolaceae
Genus	Rhodotorula
Name match metric	higherMatch
Scientific name authorship	F.C.Harrison
Name parse type	OTU

Geospatial

Country	Australia
State or Territory	Tasmania
Latitude	-42.837859 Supplied as: "-42.837859"
Longitude	147.311435 Supplied as: "147.311435"
Datum	EPSG:4326
Coordinate precision	Unknown
Terrestrial	true
Biome	TERRESTRIAL
Marine	false
Country Code	AU

Additional properties

0000012	5 Intensive Uses
0000013	5.4.1 Urban residential
0000014	Soil [ENVO_00001998]
0000016	meth_1.2 (https://research.csiro.au/ambsm/)
0000028	Free-living
0000037	meth_3.1.1 (https://research.csiro.au/ambsm/)
0000091	https://data.bioplatforms.com//organization/australian-microbiome?q=sample_id:102.100.100/138337
dna sequence	AATACTTCAACCCTCCTCTTTCTTAATGATTGAAGAGGTGTTTGGTTTCTGAGCGCTGCTGGCCTTTACGGTCTAGCTCGTTCGTAATGCATTAGCATCCGCAATCGAACTTCGGATTGACTTGGCGTAATAGACTATTCGCTGAGGAATTCTAGTCTTCGGACTAGAGCCGGGTTGGGTTAAAGGAAGCTTCTAATCAGAATGTCTACATTTTAAG

User flagged issues

Data quality tests

Test name	Result
Coordinate uncertainty meters invalid	Warning
Country inferred from coordinates	Warning
Geodetic datum assumed WGS84	Warning
Taxon match higher rank	Warning
Show/Hide 79 passed properties
Basis of record badly formed	Passed
CONTINENT_COORDINATE_MISMATCH	Passed
Continent country mismatch	Passed
Continent derived from coordinates	Passed
CONTINENT_DERIVED_FROM_COUNTRY	Passed
Continent invalid	Passed
Coordinates centre of country	Passed
Supplied coordinates centre of state	Passed
Coordinate invalid	Passed
Coordinates are out of range for species	Passed
Coordinates converted to WGS84	Passed
Decimal latitude/longitude conversion failed	Passed
Coordinate reprojection suspicious	Passed
Coordinate rounded	Passed
Coordinates dont match supplied country	Passed
Country invalid	Passed
Country mismatch	Passed
First of the century	Passed
First of the month	Passed
First of the year	Passed
Unrecognized geodetic datum	Passed
Georeferenced after occurrence date	Passed
Identification date before occurrence date	Passed
Interpretation error	Passed
Invalid scientific name	Passed
Location not supplied	Passed
Missing collection date	Passed
Multimedia date invalid	Passed
Multimedia uri invalid	Passed
Name not supplied	Passed
Occurrence status inferred from basis of record	Passed
Occurrence status inferred from individual count	Passed
Occurrence status unparsable	Passed
Latitude is negated	Passed
Longitude is negated	Passed
Presumed swapped coordinate	Passed
Recorded date invalid	Passed
Recorded date mismatch	Passed
Recorded date unlikely	Passed
SCIENTIFIC_NAME_AND_ID_INCONSISTENT	Passed
Sensitivity report invalid	Passed
Sensitivity report not loadable	Passed
Coordinates dont match supplied state	Passed
Taxon affinity species	Passed
TAXON_CONCEPT_ID_NOT_FOUND	Passed
Taxon confer species	Passed
Taxon default match	Passed
Taxon error	Passed
Taxon excluded	Passed
Taxon excluded associated	Passed
Taxon homonym	Passed
TAXON_ID_NOT_FOUND	Passed
Taxon indeterminate species	Passed
Taxon match aggregate	Passed
Taxon match fuzzy	Passed
TAXON_MATCH_NAME_AND_ID_AMBIGUOUS	Passed
Taxon match none	Passed
TAXON_MATCH_TAXON_CONCEPT_ID_IGNORED	Passed
TAXON_MATCH_TAXON_ID_IGNORED	Passed
Taxon misapplied	Passed
Taxon misapplied matched	Passed
Taxon parent child synonym	Passed
Taxon question species	Passed
Resource taxonomic scope mismatch	Passed
Taxon species plural	Passed
Coordinate precision and uncertainty transposed	Passed
Uncertainty not specified	Passed
Supplied country not recognised	Passed
Kingdom not recognised	Passed
Supplied coordinates are zero	Passed
Biosecurity issue	Passed
Suspected outlier	Passed
Geospatial issue	Passed
Habitat incorrect for species	Passed
Taxon misidentified	Passed
Taxonomic issue	Passed
Temporal issue	Passed
Other issue	Passed
Duplicate record	Passed
Show/Hide 7 missing properties
Missing geodetic datum	Missing
Missing georeferenced by	Missing
Missing georeference protocol	Missing
Missing georeference sources	Missing
Missing georeference verification status	Missing
Missing georeference date	Missing
Missing taxon rank	Missing
Show/Hide 34 tests that have not been run
Unrecognized collection code	Unchecked (lack of data)
Unrecognized institution code	Unchecked (lack of data)
Coordinate precision invalid	Unchecked (lack of data)
Footprint SRS invalid	Unchecked (lack of data)
Footprint WKT mismatch	Unchecked (lack of data)
Footprint WKT invalid	Unchecked (lack of data)
TAXON_MATCH_SCIENTIFIC_NAME_ID_IGNORED	Unchecked (lack of data)
SCIENTIFIC_NAME_ID_NOT_FOUND	Unchecked (lack of data)
Depth value supplied in feet	Unchecked (lack of data)
Depth unlikely	Unchecked (lack of data)
Min and max depth reversed	Unchecked (lack of data)
Depth value non-numeric	Unchecked (lack of data)
Elevation unlikely	Unchecked (lack of data)
Min and max altitude reversed	Unchecked (lack of data)
Altitude value supplied in feet	Unchecked (lack of data)
Altitude value non-numeric	Unchecked (lack of data)
Modified date invalid	Unchecked (lack of data)
Modified date unlikely	Unchecked (lack of data)
Identified date unlikely	Unchecked (lack of data)
Identified date invalid	Unchecked (lack of data)
Type status invalid	Unchecked (lack of data)
References uri invalid	Unchecked (lack of data)
Individual count invalid	Unchecked (lack of data)
Individual count conflicts with occurrence status	Unchecked (lack of data)
Georeferenced date unlikely	Unchecked (lack of data)
Georeferenced date invalid	Unchecked (lack of data)
Ambiguous institution	Unchecked (lack of data)
Ambiguous collection	Unchecked (lack of data)
Institution not matched	Unchecked (lack of data)
Collection not matched	Unchecked (lack of data)
Institution match fuzzy	Unchecked (lack of data)
Collection match fuzzy	Unchecked (lack of data)
Institution and Collection mismatch	Unchecked (lack of data)
Different owner institution	Unchecked (lack of data)

Group	Field Name	Original Value	Processed Value


Classification	Scientific name	SH1008722.09FU	Rhodotorula
	Match type		higherMatch
	Phylum id		NZOR-6-112901
	Taxon concept ID		https://id.biodiversity.org.au/node/fungi/60100963
	Order	Sporidiobolales	Sporidiobolales
	Taxon rank id		6000
	Genus	Rhodotorula	Rhodotorula
	Left		658668
	Scientific name authorship		F.C.Harrison
	Taxon rank		genus
	Genus id		https://id.biodiversity.org.au/node/fungi/60100963
	Taxon ID	ASV:025b41c7a336b24c1f0c5ec1aa827fd4
	Name type		OTU
	Order id		NZOR-6-46480
	Right		658700
	Kingdom	Fungi	Fungi
	Class id		NZOR-6-67422
	Phylum	Basidiomycota	Basidiomycota
	Class	Microbotryomycetes	Microbotryomycetes
	Family	Sporidiobolaceae
	Kingdom id		https://id.biodiversity.org.au/taxon/fungi/60119249
Event	Event ID	102.100.100/138337
	Year		2019
	End day of year		313
	Month		11
	Date precision		DAY
	Start day of year		313
	Day		9
	Event date	2019-11-09T03:15:00Z	2019-11-09
Occurrence	Occurrence status		PRESENT
	Basis of record	MATERIAL_SAMPLE	MATERIAL_SAMPLE
	Organism quantity	1
	Material sample ID	102.100.100/138337
	Occurrence ID	102.100.100/138337:025b41c7a336b24c1f0c5ec1aa827fd4
	Organism quantity type	DNA sequence reads	DNA sequence reads
	Recorded by	Penelope Jones/Emily Flies
Attribution	Data resource		Australian Microbiome ITS2 (Fungi)
	License		other
	Data Resource ID	dr23162	dr23162
Location	Country		Australia
	Decimal latitude	-42.837859	-42.837859
	Terrestrial	true	true
	Decimal longitude	147.311435	147.311435
	State province		Tasmania
	Biome		TERRESTRIAL
	Marine	false	false
	Country code		AU
	Geodetic datum		EPSG:4326